Kiran Kumar Halagur Bhogegowda Former Post-doc NCBS, Tentatively affiliated to Nrupathunga University, Bengaluru 560001, Karnataka, India
Rama Thyloor Associate Professor & Head, Department of Biotechnology, Nrupathunga University, Bengaluru 560001 Karnataka, India
Mukunda Suryanarayana Assistant Professor, Department of Microbiology, S.R.N.M. National College of Applied Sciences, NES Campus, Balraj Urs Road, Shivamogga 577205 Karnataka, India
Sajeeda Niketh Associate Professor, Department of Chemistry and Biochemistry, Nrupathunga University, Bengaluru 560001 Karnataka, India
Address for correspondence: Kiran Kumar Halagur Bhogegowda, Former Post-doc NCBS, Tentatively affiliated to Nrupathunga University, Bengaluru 560001, Karnataka, India E-mail: KiranKumarhb@gmail.com
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Bhogegowda KKH, Thyloor R, Suryanarayana M, et al. The missing heritability puzzle of schizophrenia: hypothesis and plausible sources. Ind J Genet Mol Res. 2024;13(1):15-27.
Timeline
Received : February 17, 2024
Accepted : March 27, 2024
Published : June 27, 2024
Abstract
Genetic research on schizophrenia, a common psychiatric disease with complex etiology and high (56-80%) heritability, has failed to identify causal genes, variants or causative mechanisms. Given the extensive effort and limited success to date, it is imperative to review potential reasons for this missing heritability. We argue that a successful elucidation of hereditary mechanisms in schizophrenia will likely involve attention to the role of neurodevelopment and cell differentiation and consideration of the genome structure, including temporal and spatial patterns. The identification of discrete endophenotypes, the, accommodation of environmental effects at the level of gene expression, including any sex differences and patterns of mutations, including de novo events, and the use of analytic techniques that go beyond genomewide association studies. Identification of the heritable component of schizophrenia is needed to understand the cause of the disorder and to facilitate the development of effective corrective and possibly preventive measures.
References
1. Dehghan A. Genome-Wide Association Studies. 2018.Methods in Molecular Biology. doi:10.1007/978-1-4939-7868-7_4.
2. http://www.genome.gov/gwas.
3. Tinca J C Polderman, Beben Benyamin, Christiaan A de Leeuw, Patrick F Sullivan, Arjen van Bochoven, Peter M Visscher, Danielle Posthuma . Meta-analysis of the heritability of human traits based on fifty years of twin studies. 2015.Nat Genet. Jul;47(7):702-9. doi:10.1038/ng.3285.
4. Jian Yang, Beben Benyamin, Brian P McEvoy, Scott Gordon, Anjali K Henders, Dale R Nyholt, Pamela A Madden, Andrew C Heath, Nicholas G Martin, Grant W Montgomery, Michael E Goddard, Peter M Visscher. Common SNPs explain a large proportion of the heritability for human height. 2010. Nature Genetics. 42 (7): 565-9. doi: 10.1038/ng.608.
5. Margaret M. DeAngelis, Leah A. Owen, Margaux A. Morrison, Denise J. Morgan, Mingyao Li, Akbar Shakoor, Albert Vitale, Sudha Iyengar, Dwight Stambolian, Ivana K Kim, Lindsay A Farrer. Genetics of age-related macular degeneration (AMD). 2017. Human Molecular Genetics. 26 (R1): R45–R50. doi: 10.1093/hmg/ddx228.
6. Emmanuelle Génin . Missing heritability of complex diseases: case solved? 2020. Human Genetics. 139 (1): 103-113. doi: 10.1007/s00439-019-02034-4.
7. Manolio TA, Collins FS, Cox NJ, Goldstein DB, Hindorff LA, Hunter DJ, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti, Judy H Cho, Alan E Guttmacher, Augustine Kong, Leonid Kruglyak, Elaine Mardis, Charles N Rotimi, Montgomery Slatkin, David Valle, Alice S Whittemore, Michael Boehnke, Andrew G Clark, Evan E Eichler, Greg Gibson, Jonathan L Haines, Trudy F C Mackay, Steven A McCarroll, Peter M Visscher Finding the missing heritability of complex diseases. 2009.Nature. Oct 8;461(7265):747-53. doi:10.1038/nature08494.
8. Mansour Zamanpoor. Schizophrenia in a genomic era: a review from the pathogenesis, genetic and environmental etiology to diagnosis and treatment insights. 2020. Psychiatric Genetics. 30 (1):1-9. doi: 10.1097/YPG.0000000000000245.
9. Jana Janoutova, Petra Janackova, Omar Sery, Tomas Zeman, Petr Ambroz, Katerina Varechova, Ladislav Hosak, Vitezslav Jirik, Vladimir Janout. Epidemiology and risk factors of schizophrenia. 2016. Neuro Endocrinology Letter. 37 (1):1-8.
10. Cardno AG, Gottesman II. Twin studies of schizophrenia: from bow-and-arrow concordances to star wars Mx and functional genomics. 2000.Am J Med Genet. Spring;97(1):12-7.
11. Justus U. Onu, Jude U. Ohaeri, Ngozi N. Unaogu, Chikaodili M. Inechi, Nwamaka B. Nweze, Vincent N. Ubochi, Jojo U Onwukwe Morbid risk of schizophrenia amongst relatives of schizophrenia probands: A family-controlled study.2018. . South African Journal of Psychiatry. 24: 1173. doi: 10.4102/ sajpsychiatry.v24i0.1173.
12. Tinca J C Polderman, Beben Benyamin, Christiaan A de Leeuw, Patrick F Sullivan, Arjen van Bochoven, Peter M Visscher, Danielle Posthuma.Meta-analysis of the heritability of human traits based on fifty years of twin studies. 2015. Nat Genet. Jul;47(7):702- 9. doi: 10.1038/ng.3285.
13. Paul Lichtenstein, Benjamin H Yip, Camilla Björk, Yudi Pawitan, Tyrone D Cannon, Patrick F Sullivan, Christina M Hultman.Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study. 2009. Lancet 373(9659), 234–239.
14. Long Jeffrey C. Gene Genealogy in The International Encyclopedia of Biological Anthropology, Wenda Trevathan (ed). 2018. John Wiley and Sons, Inc. (In press).
15. https://www.schizophreniaforum.org/.
16. Farsi Z and Sheng M. Molecular mechanisms of schizophrenia: Insights from human genetics.2023. Current Opinion in Neurobiology. 81:102731. doi. org/10.1016/j.conb.2023.102731.
17. Sophie E Legge, Marcos L Santoro, Sathish Periyasamy, Adeniran Okewole, Arsalan Arsalan, Kaarina Kowalec. Genetic architecture of schizophrenia: a review of major advancements. 2021. Psychological Medicine. 51 (13): 2168-2177. doi: 10.1017/S0033291720005334.
18. Josephine Mollon, Laura Almasy, Sebastien Jacquemont, David C Glahn. The contribution of copy number variants to psychiatric symptoms and cognitive ability. 2023. Molecular Psychiatry. (4):1480-1493. doi: 10.1038/ s41380-023-01978- 4.PMID: 36737.2020.
19. Verneri Anttila, Brendan Bulik-Sullivan, Hilary K Finucane, Raymond K Walters, Jose Bras, Laramie Duncan. et al., 2018. Brainstorm Consortium. Analysis of shared heritability in common disorders of the brain. Science. Jun 22;360(6395):eaap8757. doi: 10.1126/science.aap8757.
20. Aswin Sekar, Allison R Bialas, Heather de Rivera, Avery Davis, Timothy R Hammond, Nolan Kamitaki, Katherine Tooley, Jessy Presumey, Matthew Baum, Vanessa Van Doren, Giulio Genovese, Samuel A Rose, Robert E Handsaker; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Mark J Daly, Michael C Carroll, Beth Stevens, Steven A McCarroll. 2016. Schizophrenia risk from complex variation of complement component 4.Nature.Feb 11;530(7589):177-83. doi: 10.1038/nature16549.
21. Hreinn Stefansson, Roel A Ophoff, Stacy Steinberg, Ole A Andreassen, Sven Cichon, Dan Rujescu, Thomas Werge.2009.Common variants conferring risk of schizophrenia. Nature.Aug 6;460(7256):744-7. doi: 10.1038/nature08186.
22. P Deb-Rinker, T A Klempan, R L O'Reilly, E F Torrey, S M Singh. Molecular characterization of a MSRV-like sequence identified by RDA from monozygotic twin pairs discordant for schizophrenia. 1999. Genomics Oct 15;61(2):133-44. doi: 10.1006/geno.1999.5946.
23. Paromita Deb-Rinker 1, Richard L O'Reilly, E Fuller Torrey, Shiva M Singh. Molecular characterization of a 2.7-kb, 12q13-specific, retroviral-related sequence isolated by RDA from monozygotic twin pairs discordant for schizophrenia. 2002.Genome. Apr;45(2):381-90. doi: 10.1139/g01-152.
24. Joel Gruchot, Felisa Herrero, Ulrike Weber-Stadlbauer, Urs Meyer, Patrick Küry. Interplay between activation of endogenous retroviruses and inflammation as common pathogenic mechanism in neurological and psychiatric disorders. 2023. Brain Behav Immun. Jan;107:242-252. doi: 10.1016/j.bbi.2022.10.007.
25. Kathryn J Bryan, Xiongwei Zhu, Peggy L Harris, George Perry, Rudy J Castellani, Mark A Smith, Gemma Casadesus. Expression of CD74 is increased in neurofibrillary tangles in Alzheimer's disease. 2008.Mol Neurodegener. Sep 11:3:13. doi: 10.1186/1750-1326-3-13.
26. Michelle M A Fernando 1, Christine R Stevens, Emily C Walsh, Philip L De Jager, Philippe Goyette, Robert M Plenge, Timothy J Vyse, John D Rioux. Defining the role of the MHC in autoimmunity: a review and pooled analysis. 2008.PLoS Genet. Apr 25;4(4):e1000024. doi: 10.1371/journal. pgen.1000024.
27. H B Kiran Kumar, Christina Castellani, Sujit Maiti, Richard O'Reilly, Shiva M Singh. Search for missing schizophrenia genes will require a new developmental neurogenomic perspective. 2013. J Genet ;92(2):335-40. doi: 10.1007/s12041-013-0262-y.
28. Clara Casey ,John F Fullard and Roy D Sleator. Unravelling the genetic basis of Schizophrenia. 2024. Gene.15: 902: 148198. doi: 10.1016/j.gene.2024. 148198.
29. Rikke Hilker, Dorte Helenius, Birgitte Fagerlund, Axel Skytthe, Kaare Christensen, Thomas M Werge, Merete Nordentoft, Birte Glenthøj. Heritability of Schizophrenia and Schizophrenia Spectrum Based on the Nationwide Danish Twin Register. 2018. Biol Psychiatry.Mar 15;83(6):492-498. doi: 10.1016/j. biopsych.2017.08.017. Epub 2017 Sep 1.
30. Akira Imamura, Yoshiro Morimoto, Shinji Ono, Naohiro Kurotaki, Shinji Kanegae, Naoki Yamamoto, Hirohisa Kinoshita,Takahiro Tsujita, Yuji Okazaki, Hiroki Ozawa. Genetic and environmental factors of schizophrenia and autism spectrum disorder: insights from twin studies. 2020. Journal of Neural Transmission. 127 (11): 1501–1515. doi: 10.1007/s00702-020-02188-w.
31. Dongfeng Zhang, Shuxia Li, Qihua Tan, Zengchang Pang. Twin-based DNA methylation analysis takes the center stage of studies of human complex diseases. 2012. J Genet Genomics. Nov 20;39(11):581-6. doi: 10.1016/j.jgg.2012.07.012.
32. C A Castellani, M G Melka., J L Gui , R L O'Reilly, S M Singh. Integration of DNA sequence and DNA methylation changes in monozygotic twin pairs discordant for schizophrenia. 2015. Schizophrenia Research.169 (1-3): 433-440. doi:10.1016/j. schres.2015.09.021.
33. Christina A Castellani., Benjamin I Laufer., Melkaye G Melka., Eric J Diehl., Richard L O'Reilly., Shiva M Singh. DNA methylation differences in monozygotic twin pairs discordant for schizophrenia identifies psychosis related genes and networks. 2015. Genomics. 6:8:17. doi:10.1186/s12920-015-0093-1.
34. Ephrat Levy-Lahad., Mary-Claire King. Hiding in Plain Sight - Somatic Mutation in Human Disease. 2020. New England Journal of Medicine. 383 (27): 2680-2682. doi: 10.1056/NEJMe2030754.
35. Illana Gozes. A Different Outlook at Psychiatric and Neurological Diseases: Brain Somatic Mutations Are Implicated in Schizophrenia. 2021. Biological Psychiatry. 90 (1): 6-8. doi:10.1016/j. biopsych.2021.04.013.
36. Shiva M Singh, Christina Castellani, Richard O'Reilly. Autism meets schizophrenia via cadherin pathway. 2010. Schizophr Res. Feb;116(2-3):293-4. doi: 10.1016/j.schres.2009.09.031.
37. Stachowicz K. Physicochemical Principles of Adhesion Mechanisms in the Brain. 2023.Int J Mol Sci. Mar 7;24(6):5070. doi: 10.3390/ijms24065070.
38. Carl E G Bruder 1, Arkadiusz Piotrowski, Antoinet A C J Gijsbers, Robin Andersson, Stephen Erickson, Teresita Diaz de Ståhl, Uwe Menzel, Johanna Sandgren, Desiree von Tell, Andrzej Poplawski, Michael Crowley, Chiquito Crasto, E Christopher Partridge, Hemant Tiwari, David B Allison, Jan Komorowski, Gert-Jan B van Ommen, Dorret I Boomsma, Nancy L Pedersen, Johan T den Dunnen, Karin Wirdefeldt, Jan P Dumanski. Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles.2008.Am J Hum Genet.Mar;82(3):763-71. doi: 10.1016/j.ajhg.2007.12.011.
39. Behjat Ul Mudassir, Mashael Alhumaidi Alotaibi, Nadeem Kizilbash, Daliyah Alruwaili, Anwar Alruwaili, Modhi Alenezi, Zehra Agha. Genome-wide CNV analysis uncovers novel pathogenic regions in cohort of five multiplex families with neurodevelopmental disorders. 2023.Heliyon.Sep 1;9(9):e19718. doi: 10.1016/j. heliyon.2023.e19718.
40. Ranabir Chakraborty, M J Vijay Kumar, James P Clement . Critical aspects of neurodevelopment.2021. Neurobiol Learn Mem.Apr:180:107415. doi: 10.1016/j.nlm.2021.107415.
41. Andrea Schmitt, Peter Falkai, Sergi Papiol. Neurodevelopmental disturbances in schizophrenia: evidence from genetic and environmental factors. 2023. Journal of Neural Transmission. 130 (3):195-205. doi: 10.1007/s00702- 022-02567-5.
42. Westra JW, Peterson SE, Yung YC, Mutoh T, Barral S, Chun J. Aneuploid mosaicism in the developing and adult cerebellar cortex. 2008. J Comp Neurol. Apr 20;507(6):1944-51. doi: 10.1002/cne.21648.
43. Siyuan Liu, Nirmala Akula, Paul K Reardon, Jill Russ, Erin Torres, Liv S Clasen, Jonathan Blumenthal, Francois Lalonde,Francis J McMahon, Francis Szele, Christine M Disteche, M Zameel Cader, Armin Raznahan. Aneuploidy effects on human gene expression across three cell types. 2023. Proceedings of the National Academy of Sciences U S A.120 (21): e2218478120. doi: 10.1073/pnas.
44. Marie E Jonsson, Per Ludvik Brattas, Charlotte Gustafsson, Rebecca Petri, David Yudovich, Karolina Pircs, Shana Verschuere, Sofia Madsen, Jenny Hansson, Jonas Larsson, Robert Månsson, Alexander Meissner, Johan Jakobsson. 2019. Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors. Nature Communication. 10(1):3182. doi: 10.1038/s41467-019-11150-8.
45. Rikke Hilker, Dorte Helenius, Birgitte Fagerlund, Axel Skytthe, Kaare Christensen, Thomas M Werge, Merete Nordentoft, Birte Glenthoj. 2018.Heritability of Schizophrenia and Schizophrenia Spectrum Basedon the Nationwide Danish Twin Register.Biol Psychiatry. Mar15;83(6):492-498.
46. Bonnie R Joubert, Kari E North, Yunfei Wang, Victor Mwapasa, Nora Franceschini, Steven R Meshnick, Ethan M Lange. Comparison of genomewide variation between Malawians and African ancestry HapMap populations. 2010. J Hum Genet Jun;55(6):366-74. doi:10.1038/jhg.2010.41.
47. The International Schizophrenia Consortium. Nature index(Accessed August 2023).
48. Marshall CR, Howrigan DP, Merico D, Thiruvahindrapuram B, Wu W, Greer DS,et al., Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. 2017.Nat Genet. Jan;49(1):27-35. doi: 10.1038/ng.3725
49. A L Richards, G Leonenko, J T Walters, D H Kavanagh, E G Rees, A Evans, K D Chambert,J L Moran, J Goldstein, B M Neale, S A McCarroll, A J Pocklington, P A Holmans, M J Owen, M C O'Donovan.Exome arrays capture polygenic rare variant contributions to schizophrenia. 2016. Hum Mol Genet. Mar 1;25(5):1001-7. doi: 10.1093/ hmg/ddv620.
50. Wessel, J. Common Disease-Common Variant. In: Gellman, M.D., Turner, J.R. (eds) 2013. Encyclopedia of Behavioral Medicine.Springer, New York, NY. https://doi.org/10.1007/978-1-4419-1005-9_679.
51. Anna C Need, Joseph P McEvoy, Massimo Gennarelli, Erin L Heinzen, Dongliang Ge, Jessica M Maia, Kevin V Shianna,Min He, Elizabeth T Cirulli, Curtis E Gumbs, Qian Zhao, C Ryan Campbell, Linda Hong, Peter Rosenquist, Anu Putkonen,Tero Hallikainen, Eila Repo-Tiihonen, Jari Tiihonen, Deborah L Levy, Herbert Y Meltzer, David B Goldstein. Exome sequencing followed by large-scale genotyping suggests a limited role for moderately rare risk factors of strong effect in schizophrenia. 2012.Am J Hum Genet.Aug 10;91(2):303-12.
52. Andrew K Martin, Gail Robinson, David Reutens, Bryan Mowry. Clinical and parental age characteristics of rare copy number variant burden in patients with schizophrenia. 2015.Am J Med Genet B Neuropsychiatr Genet.Jul;168B(5):374-82.
53. Yukihide Momozawa and Keijiro Mizukami. Unique roles of rare variants in the genetics of complex diseases in humans. 2021. Journal of Human Genetics. 66 (1): 11-23. doi: 10.1038/s10038- 020-00845-2.
54. James R. Lupski,John W. Belmont,Eric Boerwinkle and Richard A.Clan. Genomics and the Complex Architecture of Human Disease 2011. Cell. Sep 30; 147(1): 32–43.doi: 10.1016/j.cell.2011.09.008.
55. Jon M McClellan, Anthony W Zoghbi, Joseph D Buxbaum, Carolina Cappi, James J Crowley, Jonathan Flint, Dorothy E Grice,Suleyman Gulsuner, Conrad Iyegbe, Sanjeev Jain, Po-Hsiu Kuo, Maria Claudia Lattig, Maria Rita Passos-Bueno, Meera Purushottam,Dan J Stein, Anna B Sunshine, Ezra S Susser, Christopher A Walsh, Olivia Wootton, Mary-Claire King. An evolutionary perspective on complex neuropsychiatric disease. 2024.Neuron.Jan 3;112(1):7-24.
56. Sathish Periyasamy, Pierre Youssef, Sujit John, Rangaswamy Thara, Bryan J Mowry. Genetic interactions of schizophrenia using gene-based statistical epistasis exclusively identify nervous system-related pathways and key hub genes. 2024 Front Genet Jan 8:14:1301150. doi: 10.3389/ fgene.2023.1301150. eCollection 2023.
57. Debora Garza-Hernandez, Maricruz SepulvedaVillegas, Jose Garcia-Pelaez, Raul Aguirre-Gamboa, Peter L Lakatos, Karol Estrada, Manuel MartinezVazquez, Victor Trevino. A systematic review and functional bioinformatics analysis of genes associated with Crohn's disease identify more than 120 related genes. 2022. Genomics. 23 (1): 302. doi: 10.1186/s12864-022-08491-y.
58. Rajagopal VM, Rajkumar AP, Jacob KS, Jacob M. Gene-gene interaction between DRD4 and COMT modulates clinical response to clozapine in treatment-resistant schizophrenia. 2018. Pharmacogenet Genomics. Jan;28(1):31-35. doi: 10.1097/FPC.0000000000000314.
59. Marta Bosia 1, Cristina Lorenzi, Adele Pirovano, Carmelo Guglielmino, Federica Cocchi, Marco Spangaro, Placido Bramanti, Enrico Smeraldi, Roberto Cavallaro. COMT Val158Met and 5-HT1A-R-1019 C/G polymorphisms: effects on the negative symptom response to clozapine. 2015. Pharmacogenomics. 16 (1): 35-44. doi: 10.2217/ pgs.14.150.
60. Minali Singh., Sonal Saxena., Kommu Naga Mohan. DNMT1 downregulation as well as its overexpression distinctly affect mostly overlapping genes implicated in schizophrenia, autism spectrum, epilepsy, and bipolar disorders. 2023. Frontiers in Molecular Neuroscience. 16: 1275697. doi: 10.3389/ fnmol.2023.1275697.
61. Bird, A. Perceptions of Epigenetics. 2007. Nature. 447: 396-398.
62. Marco Trerotola, Valeria Relli, Pasquale Simeone, Saverio Alberti. Epigenetic inheritance and the missing heritability. 2015. Hum Genomics. Jul 28;9(1):17. doi: 10.1186/s40246-015-0041-3.
63. Xinyang Yu, Hao Zhao, Ruiqi Wang, Yingyin Chen, Xumei Ouyang, Wenting Li, et al.,2024.Cancer epigenetics: from laboratory studies and clinical trials to precision medicine. Cell Death Discovery volume 10, Article number: 28.
64. Xinyang Yu, Hao Zhao, Ruiqi Wang, Yingyin Chen, Xumei Ouyang, Wenting Li, Yihao Sun 4, Anghui Peng. Epigenetics of Ageingand Psychiatric Disorders. 2024.vJ Integr Neurosci. Jan 16;23(1):13. doi: 10.31083/j.jin2301013.
65. Anway MD, Cupp AS, Uzumcu M, Skinner MK. Epigenetic transgenerational actions of endocrine disruptors and male fertility.2005.Science.Jun 3;308(5727):1466-9. doi: 10.1126/science.1108190.
66. Javierre, B.M., Fernandez, A.F., Richter, J., Al-Shahrour, F., Martin-Subero, J.I., J., et al. (2009). Changes in the pattern of DNA methylation associate with twindiscordanceinsystemiclupuseryt hematosus.GenomeResearch.20(2):170-179.https:// doi.org/10.1101/gr.100289.109.
67. Brookes, K.J. The VNTR in Complex Disorders: The Forgotten Polymorphisms? A Functional Way forward? 2013.Genomics.101:273281.https://doi. org/10.1016/j.ygeno.2013.03.003.
68. Irizarry, R.A., Wu, H., & Feinberg, A.P. The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissuespecific CpG island shores.2009. Nature Genetics. 41: 178-86. https://doi.org/10.1038/ng.298.
69. Graham, J.H., Schlachetzki, J.C.M., Yang, X. et al. Genomic Mosaicism of the Brain: Origin, Impact, and Utility. Neurosci. Bull. 2023. https://doi. org/10.1007/s12264-023-01124-8.
70. C.R. Darwin, The Descent of Man, and Selection in Relation to Sex, John Murray, London, 1st edition 1871, 2nd edition, 1872.
71. PsychENCODE Consortium -psychENCODE.org.
72. Rama S Singh, Karun K Singh, Shiva M Singh. Origin of Sex-Biased Mental Disorders: An Evolutionary Perspective. 2021. J Mol Evol.Jun;89(4-5):195-213. doi: 10.1007/s00239-021-09999-9.
74. Xi Wu, Cong Huai, Lu Shen, Mo Li, Chao Yang, Juan Zhang, Luan Chen, Wenli Zhu, Lingzi FanWei Zhou, Qinghe Xing, Lin He,Chunling Wan, Shengying Qin. 2021. Iscience. 24(8):102894. https://doi.org/10.1016/j.isci.2021.102894.
75. Yunjung Kim, Stephan Ripke, George Kirov, Pamela Sklar, Shaun M Purcell, Michael J Owen, Michael C O'Donovan, Patrick F Sullivan.Nonrandom mating, parent-of-origin, and maternalfetal incompatibility effects in schizophrenia. 2013. Schizophrenia Research.143(1):11-7.https://doi. org/10.1016%2Fj.schres.2012.11.002.
76. Augustine Kong 1, Valgerdur Steinthorsdottir, Gisli Masson, Gudmar Thorleifsson, Patrick Sulem, Soren Besenbacher, Aslaug Jonasdottir, Asgeir Sigurdsson, Kari Th Kristinsson, Adalbjorg Jonasdottir, Michael L Frigge, Arnaldur Gylfason, Pall I Olason, Sigurjon A Gudjonsson, Sverrir Sverrisson, Simon N Stacey, Bardur Sigurgeirsson, Kristrun R Benediktsdottir, Helgi Sigurdsson, et al. Parental origin of sequence variants associated with complex diseases. 2009. Nature. 462 (7275): 868-874.
77. Riordan JD, Nadeau JH. From Peas to Disease: Modifier Genes, Network Resilience, and the Genetics of Health. 2017. Am J Hum Genet. Aug 3;101(2):177-191. doi:10.1016/j.ajhg.2017.06.004.
78. Joanne Trinh, Emil K Gustavsson, Carles VilarinoGuell, Stephanie Bortnick, Jeanne Latourelle, Marna B McKenzie, Chelsea Szu Tu, Ekaterina Nosova, Jaskaran Khinda, Austen Milnerwood, Suzanne Lesage, Alexis Brice, Meriem Tazir, Jan O Aasly, Laura Parkkinen, Hazal Haytural, Tatiana Foroud. et al.,2016 DNM3 and genetic modifiers of age of onset in LRRK2 Gly2019Ser parkinsonism: a genome-wide linkage and association study. Lancet Neurol.Nov;15(12):1248-1256. doi: 10.1016/S1474- 4422(16)30203-4.
79. Sarah E Bergen, Colm T O'Dushlaine, Phil H Lee, Ayman H Fanous, Douglas M Ruderfer, Stephan Ripke; International Schizophrenia Consortium, Swedish Schizophrenia Consortium; Patrick F Sullivan, Jordan W Smoller, Shaun M Purcell, Aiden Corvin.Genetic modifiers and subtypes in schizophrenia: investigations of age at onset, severity, sex and family history. 2014. Schizophr Res. Apr;154(1-3):48-53. doi: 10.1016/j. schres.2014.01.030.
80. Honnay, O. Genetic Drift. In: Brenner’s Encyclopedia of Genetics, Second Edition, (2013). Academic Press, San Diego, 251-253. https://doi.org/10.1016/B978- 0-12-374984-0.00616-1.
81. Keller MC. Evolutionary Perspectives on Genetic and Environmental Risk Factors for Psychiatric Disorders. 2018.Annu Rev Clin Psychol. May 7;14:471-493. doi: 10.1146/annurevclinpsy-050817-084854. Epub 2018 Jan 24.
82. Ashraf, B.H., Jensen, J., Asp, T., & Janss, L.L. (2014). Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing. Theoretical Applied Genetics. 127:1331-1341. https://doi. org/10.1007/s00122-014-2300-4.
83. Jayant Mahadevan, Ajai Kumar Pathak, Alekhya Vemula, Ravi Kumar Nadella, Biju Viswanath, Sanjeev Jain, et al., Accelerator Program for Discovery in Brain disorders using Stem cells (ADBS) Consortium, 2021. Analysis of whole exome sequencing in severe mental illness hints at selection of brain development and immune related genes.Sci Rep.; 11: 21088. Published online 2021 Oct 26. doi: 10.1038/s41598-021-00123-x.
84. Visscher PM, Wray NR. Concepts and Misconceptions about the Polygenic Additive Model Applied to Disease. 2015.Hum Hered;80(4):165-70. doi: 10.1159/000446931. Epub 2016 Sep.
85. Selita F, Kovas Y. Genes and gini: what inequality means for heritability. 2019. J Biosoc Sci. Jan; 51(1): 18-47. doi: 10.1017/S0021932017000645. Epub 2018 Feb 1.
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Corresponding author would like to dedicate this paper to the Lotus feet of Jagadgurus of Sringeri Sharada Peetam, late grandparents and parents, all teachers during BSc, MSc, PhD, Pdf who have helped directly or indirectly in the noble task of acquiring and dissemination of knowledge and imparting me with values and ethics.
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Acknowledgements
The Honourable Vice-Chancellor, Nrupathunga university, Bangalore. For providing the logistics and encouragement.
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Bhogegowda KKH, Thyloor R, Suryanarayana M, et al. The missing heritability puzzle of schizophrenia: hypothesis and plausible sources. Ind J Genet Mol Res. 2024;13(1):15-27.
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